Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015932081.1_cds_XP_016478671.1_70289
CDS Infomation

[gene=LOC107800043] [db_xref=GeneID:107800043] [protein=cell division cycle protein 48 homolog] [protein_id=XP_016478671.1] [location=join(1278..1437,1947..2713,2803..3024,3204..3275,3367..3648,3859..4218,4857..5147)] [gbkey=CDS]
Sequence

ATGAACAAGGTTGTCCGTTCAAATTTGAGGGTTCGGCTTGGAGATGTTGTGTCTGTGCAC
CAATGTCCAGATGTTAAGTATGGAAAACGTGTGCACATACTTCCCATAGATGATACAATA
GAAGGTCTCACCGGGGATTTGTTTGATGCATTCTTGAAACCTTACTTTTTGGAAGCATAT
CGTCCTTTGAGGAAAGGGGACAATTTCCTTGTTAGAGGAGGGATGAGAAGTGTGGAATTT
AAAGTCATCGAGACTGACCCTGGGGAGTATTGTGTTGTTGCTCCAGACACAGAAATCTTT
TGCGAGGGGGAGCCTGTTAAAAGGGAGGATGAAGAGAGACTGGACGAAGTTGGCTATGAT
GATGTTGGTGGTGTGAGAAAACAGATGGCTCAGATTCGTGAATTGGTGGAATTACCATTG
AGGCATCCGCAGCTTTTTAAATCCATTGGTGTGAAACCACCAAAGGGGATTTTACTTTAT
GGACCCCCTGGATCTGGGAAGACCCTGATAGCCAGAGCTGTGGCTAATGAAACAGGTGCA
TTTTTCTTTTGCATTAATGGACCGGAAATCATGTCCAAATTGGCTGGAGAGAGTGAAAGC
AATCTCAGGAAGGCATTTGAAGAGGCTGAGAAAAATGCTCCATCTATTATATTCATTGAT
GAAATTGATTCAATTGCTCCCAAGCGAGAGAAGACACATGGTGAAGTTGAGAGAAGGATT
GTTTCACAGCTCCTGACACTGATGGATGGATTGAAATCTCGTGCTCATGTCATAGTTATG
GGAGCTACCAATCGTCCTAACAGCATTGATCCTGCTCTCAGAAGGTTTGGTAGGTTTGAT
AGGGAAATTGACATTGGTGTTCCTGATGAAGTTGGACGCCTTGAAGTTCTTCGTATTCAT
ACCAAGAATATGAAGCTTGCAGAAGAAGTCGATTTGGAAAGAATATCAAAAGATACACAT
GGTTATGTCGGTGCAGATCTTGCTGCTCTTTGCACTGAAGCTGCACTTCAGTGTATTAGA
GAGAAAATGGATGTCATTGATCTTGAAGATGATTCCATTGATGCTGAAATATTGAATTCA
ATGGCTGTCACGAATGAGCACTTCCAAACTGCTCTAGGAACAAGCAATCCATCCGCATTG
CGTGAAACAGTTGTTGAAGTGCCTAATGTCTCATGGGAAGACATTGGAGGCCTTGAAAAT
GTCAAAAGAGAGCTTCAAGAGACTGTTCAATACCCTGTGGAGCATCCTGAGAAGTTCGAG
AAGTTTGGTATGTCACCTTCAAAAGGTGTTCTTTTCTATGGTCCTCCAGGATGTGGGAAA
ACTCTTCTTGCCAAGGCAATTGCAAATGAATGTCAAGCCAATTTCATCAGTGTCAAAGGA
CCTGAGCTGCTCACCATGTGGTTTGGAGAGAGCGAGGCCAATGTCCGTGAAATTTTTGAC
AAGGCCAGACAATCTGCACCCTGTGTCCTCTTCTTTGATGAGCTCGATTCTATTGCTACT
CAGAGGGGAAGCAGTGTTGGAGATGCTGGTGGAGCAGCTGATCGGGTTCTGAACCAACTT
CTGACTGAAATGGACGGCATGAACGCAAAGAAGACCGTTTTTATAATTGGGGCCACGAAC
AGGCCTGATATAATTGACCCTGCACTTCTGCGACCTGGTCGACTTGACCAGTTAATTTAT
ATCCCACTCCCAGATGAAGACTCGCGCCATCAGATTTTCAAGGCGTGTCTCAGAAAATCT
CCCCTCTCAAAAGATGTCGATTTGAGAGCTCTTGCCAAATATACTCAGGGATTCAGTGGA
GCTGATATCACTGAGATCTGTCAACGGGCCTGCAAATATGCCATAAGGGAGAACATTGAG
AAAGATATAGAAAAGGAAAGGAAACGAAGCGAGAATCCTGATTCTATGGATGAGGATGCT
GATGATGAGATAGCAGAGATTACGCCCTCGCATTTTGAGGAGTCTATGAAGTATGCACGA
CGAAGTGTGAGTGATGCAGATATACGTAAATACCAGGCATTTGCTCAGACCTTACAGCAA
TCTCGAGGTTTTGGAACTGAATTTCGGTTTGCTGAGGCAAGTGGTGGGGCTGATGCAACT
GACCCCTTTGCAACTTCTAATGCTGGAGCTGATGATGATGACTTGTATAGCTAA

Peptide Sequence

PEP ID

XP_016478671.1
PEP Infomation

PREDICTED: cell division cycle protein 48 homolog [Nicotiana tabacum]
Sequence

MNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTIEGLTGDLFDAFLKPYFLEAY
RPLRKGDNFLVRGGMRSVEFKVIETDPGEYCVVAPDTEIFCEGEPVKREDEERLDEVGYD
DVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGA
FFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRI
VSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIH
TKNMKLAEEVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNS
MAVTNEHFQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFE
KFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFD
KARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATN
RPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPLSKDVDLRALAKYTQGFSG
ADITEICQRACKYAIRENIEKDIEKERKRSENPDSMDEDADDEIAEITPSHFEESMKYAR
RSVSDADIRKYQAFAQTLQQSRGFGTEFRFAEASGGADATDPFATSNAGADDDDLYS

Transcript Sequence

Gene sequence data has not been registered.